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The purpose of the ShadeLab Findability Crusade is to ensure that all raw data (with metadata), publications/preprints, and analysis code are linked to each other and mutually findable,
no matter which is discovered first. 
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See our GitHub readme files for examples of how we link code to papers to data!
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Code

Our code is on GitHub

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The GitHub Readme includes:

  • Citation and link to paper/preprint

  • DOI

  • Study abstract

  • Link to raw data

  • Link to funding, if applicable

Data

Our raw sequencing data is in the NCBI SRA or the JGI Genome Portal/IMG

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Data are available when we submit a preprint or a manuscript for review

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This is the hard part!  Data repositories are to include:

  • Final DOI of published piece and full citation

  • Metadata

Paper

Publications and preprints are open access

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Papers/preprints include

  • Link to GitHub repo

  • Link to raw data

  • Info is updated when preprints are accepted for publication

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